Early In Vitro Differentiation of Mouse Definitive Endoderm Is Not Correlated with Progressive Maturation of Nuclear DNA Methylation Patterns
2011

DNA Methylation Patterns in Early Differentiation of Mouse Embryonic Stem Cells

Sample size: 18000 publication Evidence: moderate

Author Information

Author(s): Tajbakhsh Jian, Gertych Arkadiusz, Fagg W. Samuel, Hatada Seigo, Fair Jeffrey H.

Primary Institution: Cedars-Sinai Medical Center, Los Angeles, California, United States of America

Hypothesis

The study investigates the relationship between differentiation and nuclear DNA methylation patterns in mouse embryonic stem cells.

Conclusion

The progression of global DNA methylation is not correlated with the standard transcription factors associated with endodermal development.

Supporting Evidence

  • The study found that differentiating cell populations display an increasing number of cells with a gain in DNA methylation load.
  • Cells showed different degrees of global methylation and spatial distributions during differentiation.
  • Significant changes in methylcytosine/global DNA codistribution patterns were observed.
  • Markers for pluripotency and endodermal commitment did not correlate with methylcytosine loads.

Takeaway

The study looks at how mouse stem cells change as they start to become different types of cells, focusing on how their DNA is modified during this process.

Methodology

The study used high-resolution three-dimensional fluorescence imaging and comprehensive topological cell-by-cell analyses to assess DNA methylation patterns.

Limitations

Further studies are needed to determine whether the progression of global methylation could represent a useful signature of cellular differentiation.

Participant Demographics

Mouse embryonic stem cells were used in the study.

Digital Object Identifier (DOI)

10.1371/journal.pone.0021861

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication