Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes
2011

How Enzyme Function Affects Evolution in Mammals

Sample size: 13928 publication Evidence: high

Author Information

Author(s): Corey M Hudson, Gavin C Conant

Primary Institution: University of Missouri

Hypothesis

Mammals would have evolved in a manner similar to Drosophila, where there is a significant association between enzyme centrality and evolutionary constraint.

Conclusion

The strength of selective constraint acting on mammalian genes is quite variable and does not appear to exclusively follow patterns seen in other organisms.

Supporting Evidence

  • Metabolic genes are under greater selective constraint than non-metabolic genes.
  • The cellular compartment of an enzyme influences its evolutionary rate.
  • There is a weak correlation between gene expression levels and selective constraint in mammals.

Takeaway

This study found that how important an enzyme is in the body affects how much it changes over time, but it's not the only factor.

Methodology

The study measured selective constraints using the ratio of nonsynonymous to synonymous substitutions (Ka/Ks) across various mammalian enzymes and their metabolic functions.

Potential Biases

Potential biases may arise from the methods used to identify orthologs and the assumptions made in estimating selective constraints.

Limitations

The study's conclusions may not apply universally across all genes and organisms due to the complexity of evolutionary factors.

Participant Demographics

The study analyzed genes from eight eutherian mammals including humans, chimpanzees, macaques, mice, rats, horses, dogs, and cows.

Statistical Information

P-Value

p<0.001

Statistical Significance

p<0.001

Digital Object Identifier (DOI)

10.1186/1471-2148-11-89

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