Use of suppression subtractive hybridisation to extend our knowledge of genome diversity in Campylobacter jejuni
2007

Understanding Genome Diversity in Campylobacter jejuni

Sample size: 81 publication Evidence: moderate

Author Information

Author(s): Philip J Hepworth, Howard Leatherbarrow, C Anthony Hart, Craig Winstanley

Primary Institution: University of Liverpool

Hypothesis

The distribution of variable genes involved in the use of alternative terminal electron acceptors may be related to host preference.

Conclusion

The study found no evidence that the presence or absence of metabolic genes plays a role in the host preferences of Campylobacter jejuni strains.

Supporting Evidence

  • 97% of the 195 subtracted sequences identified had a best BLASTX match with a Campylobacter protein.
  • There was considerable variation within and between the four clonal complexes included in the subtractions.
  • Little evidence was found for widespread horizontal gene transfer between clonal complexes involving the studied genes.

Takeaway

Scientists looked at different Campylobacter bacteria from various animals to see if their genes changed based on where they lived. They found that the genes didn't really change based on the animal they came from.

Methodology

Suppression subtractive hybridisation was used to identify variable genes in Campylobacter jejuni isolates from different sources.

Limitations

The study was dominated by isolates from cattle and human sources, which may limit the generalizability of the findings to other host species.

Participant Demographics

Isolates were from various sources including cattle, humans, rabbits, birds, and badgers.

Digital Object Identifier (DOI)

10.1186/1471-2164-8-110

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication