Chemotherapeutic agents and leucine deprivation induce codon-biased aberrant protein production in cancer
2024

Leucine Deprivation and Chemotherapy Induce Aberrant Protein Production in Cancer

publication 10 minutes Evidence: high

Author Information

Author(s): Kochavi Adva, Nagel Remco, Körner Pierre-Rene, Bleijerveld Onno B, Lin Chun-Pu, Huinen Zowi, Malka Yuval, Proost Natalie, van de Ven Marieke, Feng Xiaodong, Navarro Jasmine Montenegro, Pataskar Abhijeet, Peeper Daniel S, Champagne Julien, Agami Reuven

Primary Institution: The Netherlands Cancer Institute

Hypothesis

Leucine deprivation and chemotherapeutic agents lead to ribosomal stalling and aberrant protein production in cancer cells.

Conclusion

Leucine deprivation and DNA damage from chemotherapy induce aberrant protein production primarily at UUA codons, which can be targeted for anti-cancer therapy.

Supporting Evidence

  • Leucine deprivation leads to ribosomal stalling at UUA codons.
  • Chemotherapeutic agents induce similar effects on UUA codons.
  • Faulty protein products can be presented as neoepitopes for T-cell recognition.
  • Low levels of tRNALeu(UAA) restrict mRNA translation.
  • SLFN11 activation during DNA damage leads to similar ribosomal stalling.
  • UUA-derived aberrant peptides can elicit T-cell activation.
  • Combination of chemotherapy and T-cell therapy shows potential for tumor growth impact.

Takeaway

When cancer cells don't have enough leucine, they make mistakes while making proteins, which can help the immune system recognize and attack them.

Methodology

The study involved ribosome profiling and flow cytometry to analyze protein production in cancer cells under leucine deprivation and DNA damage conditions.

Limitations

Leucine deprivation reduced HLA expression, potentially limiting peptide presentation for immune recognition.

Statistical Information

P-Value

p<0.001

Statistical Significance

p<0.001

Digital Object Identifier (DOI)

10.1093/nar/gkae1110

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