AMMO-Prot: A 3D Model Finder for Amine-Related Proteins
Author Information
Author(s): Navas-Delgado Ismael, Montañez Raúl, Pino-Ángeles Almudena, Moya-García Aurelio A, Urdiales José Luis, Sánchez-Jiménez Francisca, Aldana-Montes José F
Primary Institution: University of Málaga
Hypothesis
The Amine System Project aims to integrate amine-related biological data using an ontology-based mediator.
Conclusion
The developed infrastructure effectively manages and integrates amine-related information, facilitating access to protein structure data.
Supporting Evidence
- The AMMO ontology was developed to enhance the integration of biological data related to amines.
- The system allows users to predict protein structures using comparative modeling techniques.
- The mediator architecture enables easy integration of various data sources.
Takeaway
This study created a tool that helps scientists find and predict the 3D shapes of proteins related to amines, which are important for many biological processes.
Methodology
An ontology-based mediator was developed to integrate various biological databases related to amine metabolism.
Limitations
The success of the project relies on the stability and availability of public databases, which are not under the authors' control.
Digital Object Identifier (DOI)
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