Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins
2006

Mapping Protein Interactions in Yeast

Sample size: 207 publication 10 minutes Evidence: moderate

Author Information

Author(s): Jay R Hesselberth, John P Miller, Anna Golob, Jason E Stajich, Gregory A Michaud, Stanley Fields

Primary Institution: University of Washington

Hypothesis

The study aims to generate a protein interaction map for WW domains in Saccharomyces cerevisiae using protein microarray technology.

Conclusion

Protein microarrays provide an appealing alternative to existing techniques for the construction of protein interaction networks.

Supporting Evidence

  • The study identified 587 interactions between 12 WW domains and 207 proteins.
  • Functional annotations within the network showed enrichments for proteins involved in peroxisomal localization.
  • The comparative approach revealed structural conservation of binding motifs across yeast lineages.

Takeaway

The researchers created a map showing how certain proteins in yeast interact with each other, helping us understand their functions better.

Methodology

Protein microarrays were used to identify interactions between WW domains and proteins in yeast.

Potential Biases

Potential false positives due to the nature of the microarray technology.

Limitations

Some proteins could not be expressed and purified, and the microarray approach may miss transient interactions.

Participant Demographics

The study focused on proteins from Saccharomyces cerevisiae.

Statistical Information

P-Value

p<0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/gb-2006-7-4-r30

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