Analysis of common PTPN1 gene variants in type 2 diabetes, obesity and associated phenotypes in the French population
2006

Study of PTPN1 Gene Variants in Type 2 Diabetes and Obesity

Sample size: 2274 publication Evidence: moderate

Author Information

Author(s): Claire Cheyssac, Cécile Lecoeur, Aurélie Dechaume, Amina Bibi, Guillaume Charpentier, Beverley Balkau, Michel Marre, Philippe Froguel, Fernando Gibson, Martine Vaxillaire

Primary Institution: CNRS UMR 8090, Institut de Biologie de Lille – Institut Pasteur

Hypothesis

The study aims to investigate the effect of PTPN1 genetic variations on the risk of type 2 diabetes (T2D), obesity, and metabolic phenotypes in the French population.

Conclusion

PTPN1 variants showed moderate association with T2D and obesity, and consistent associations with metabolic variables related to insulin resistance and dyslipidemia.

Supporting Evidence

  • SNP rs914458 significantly associated with T2D (p = 0.02).
  • SNP rs914458 also showed association with moderate obesity (p = 0.04).
  • SNPs rs941798 and rs2426159 exhibited multiple associations with metabolic traits.

Takeaway

This study looks at how certain genes might affect diabetes and obesity in people from France. It found that some gene changes are linked to these health issues.

Methodology

The study used case-control groups to evaluate the association of 14 SNPs with T2D and obesity, involving 1227 cases and 1047 controls.

Limitations

The study's findings may not be generalizable to populations outside of France, and the associations observed could be due to chance.

Participant Demographics

The study included French individuals with type 2 diabetes and normoglycaemic controls, with a total of 633 individuals in the family sample.

Statistical Information

P-Value

0.02

Confidence Interval

1.06–1.94

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2350-7-44

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