Bioinformatic Analysis of Actin-Binding Proteins in the Nucleolus During Heat Shock
2024

Actin-Binding Proteins in the Nucleolus During Heat Shock

publication Evidence: moderate

Author Information

Author(s): Taniguchi Shinya, Torii Takeru, Goto Toshiyuki, Takeuchi Kohei, Katsumi Rine, Sumida Mako, Lee Sunmin, Sugimoto Wataru, Gessho Masaya, Itoh Katsuhiko, Hirata Hiroaki, Kawakami Junji, Miyoshi Daisuke, Kawauchi Keiko

Primary Institution: Faculty of Frontiers of Innovative Research in Science and Technology (FIRST), Konan University

Hypothesis

Nucleolar actin-binding proteins might be sequestered during heat shock to prevent irreversible aggregation.

Conclusion

The study identifies 10 actin-binding proteins with high levels of intrinsically disordered regions that may play a role in the heat shock response.

Supporting Evidence

  • Heat shock induces the reversible assembly of nAC-GFP in the nucleolus.
  • 47 actin-binding proteins were identified to localize in the nucleolus.
  • 10 of these proteins exhibited high levels of intrinsically disordered regions.
  • PDLIM7 and TRIOBP were highlighted for their increased expression in response to heat shock.

Takeaway

When cells get too hot, a special part inside them called the nucleolus helps keep proteins from getting messed up by using actin, a building block of cells.

Methodology

The study used a GFP-tagged actin chromobody to visualize nuclear actin dynamics in HeLa cells during heat shock and performed bioinformatic analyses to identify actin-binding proteins.

Digital Object Identifier (DOI)

10.3390/genes15121580

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