Surface-enhanced laser desorption/ionization time-of-flight proteomic profiling of breast carcinomas identifies clinicopathologically relevant groups of patients similar to previously defined clusters from cDNA expression
2008

Proteomic Profiling of Breast Cancer

Sample size: 105 publication 10 minutes Evidence: moderate

Author Information

Author(s): Kristyna Brozkova, Eva Budinska, Pavel Bouchal, Lenka Hernychova, Dana Knoflickova, Dalibor Valik, Rostislav Vyzula, Borivoj Vojtesek, Rudolf Nenutil

Primary Institution: Masaryk Memorial Cancer Institute

Hypothesis

Can SELDI-TOF MS identify protein patterns in breast carcinomas that correlate with clinicopathological variables?

Conclusion

The study demonstrates that SELDI-TOF MS can effectively classify breast cancer tumors into groups that align with existing cDNA expression profiles.

Supporting Evidence

  • The study identified six clusters of protein peaks that correlate with different tumor types and grades.
  • Patients were grouped based on protein expression patterns that align with known breast cancer classifications.
  • The findings suggest that SELDI-TOF MS can supplement existing methods for classifying breast cancer.

Takeaway

Scientists used a special technique to look at proteins in breast cancer samples and found patterns that help group the cancers, similar to what other methods have shown.

Methodology

The study analyzed whole tissue lysates from 105 breast carcinomas using SELDI-TOF MS and performed hierarchical clustering on the resulting protein profiles.

Limitations

The follow-up period for patients was not long enough to provide valuable prognostic analysis.

Participant Demographics

All participants were female patients treated for breast cancer at the Masaryk Memorial Cancer Institute.

Statistical Information

P-Value

p<0.0029

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/bcr2101

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