Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes
2008

How Colicin E3 Affects Protein Synthesis in E. coli

publication Evidence: high

Author Information

Author(s): Lorna E Lancaster, Andreas Savelsbergh, Colin Kleanthous, Wolfgang Wintermeyer, Marina V Rodnina

Primary Institution: Institute of Molecular Biology, University of Witten/Herdecke

Hypothesis

The study investigates how colicin E3 cleavage of 16S rRNA impacts the translation process in E. coli ribosomes.

Conclusion

Colicin E3 cleavage of 16S rRNA leads to a significant inhibition of protein synthesis primarily during the elongation step of translation.

Supporting Evidence

  • Colicin E3 specifically cleaves 16S rRNA at the decoding center, inhibiting translation.
  • The cleavage leads to a significant reduction in the efficiency of aminoacyl-tRNA binding.
  • Translocation of tRNA is faster on colicin E3-cleaved ribosomes compared to intact ones.
  • Colicin E3-treated ribosomes show a complete halt in protein synthesis after a few codons.
  • Peptide bond formation is not significantly affected by colicin E3 cleavage.

Takeaway

Colicin E3 is a toxin that cuts a part of the ribosome's RNA, which stops the bacteria from making proteins, leading to their death.

Methodology

The effects of colicin E3 cleavage on ribosome functions were analyzed using a reconstituted in vitro translation system.

Limitations

The study primarily focuses on the effects of colicin E3 on translation without exploring other potential cellular impacts.

Digital Object Identifier (DOI)

10.1111/j.1365-2958.2008.06283.x

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