Clock genes and their genomic distributions in three species of salmonid fishes: Associations with genes regulating sexual maturation and cell cycling
2010

Clock Genes in Salmonid Fishes and Their Role in Reproduction

publication Evidence: moderate

Author Information

Author(s): Paibomesai Marion I, Moghadam Hooman K, Ferguson Moira M, Danzmann Roy G

Primary Institution: Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada

Hypothesis

If duplicates of the Clock-family and amh genes occurred within these salmonid genomes, then they should map to previously identified homeologous regions.

Conclusion

The study found that Clock-family gene copies are localized to major life-history QTL regions in salmonids, suggesting their role in regulating reproduction and cell cycling.

Supporting Evidence

  • Clock1 duplicates were mapped to specific linkage groups in rainbow trout, Arctic charr, and Atlantic salmon.
  • These linkage groups contain quantitative trait loci (QTL) for life history and growth traits.
  • Comparative synteny analyses revealed a high degree of conservation for genes in these chromosomal regions.

Takeaway

This study looked at special genes in salmon that help control when they grow and reproduce, showing that these genes are very similar across different fish.

Methodology

The study involved genomic sequencing and mapping of Clock family genes in rainbow trout, Arctic charr, and Atlantic salmon using family-based indels/SNPs.

Digital Object Identifier (DOI)

10.1186/1756-0500-3-215

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